Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ShdO88834 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShdO88834 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShdO88834 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ShdO88834 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.28■□□□□ 0.84
ShdO88834 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.28■□□□□ 0.84
ShdO88834 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.27■□□□□ 0.84
ShdO88834 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ShdO88834 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ShdO88834 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ShdO88834 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.27■□□□□ 0.84
ShdO88834 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ShdO88834 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ShdO88834 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ShdO88834 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ShdO88834 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ShdO88834 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ShdO88834 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
ShdO88834 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.26■□□□□ 0.83
ShdO88834 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.26■□□□□ 0.83
ShdO88834 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ShdO88834 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShdO88834 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ShdO88834 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShdO88834 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.25■□□□□ 0.83
ShdO88834 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ShdO88834 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShdO88834 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ShdO88834 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShdO88834 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ShdO88834 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShdO88834 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ShdO88834 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.25■□□□□ 0.83
ShdO88834 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ShdO88834 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.25■□□□□ 0.83
ShdO88834 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
ShdO88834 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ShdO88834 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.24■□□□□ 0.83
ShdO88834 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.24■□□□□ 0.83
ShdO88834 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShdO88834 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ShdO88834 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ShdO88834 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.23■□□□□ 0.83
ShdO88834 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.23■□□□□ 0.83
ShdO88834 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.23■□□□□ 0.83
ShdO88834 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ShdO88834 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ShdO88834 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ShdO88834 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShdO88834 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.23■□□□□ 0.83
ShdO88834 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShdO88834 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.22■□□□□ 0.83
ShdO88834 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ShdO88834 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShdO88834 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ShdO88834 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.22■□□□□ 0.83
ShdO88834 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShdO88834 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ShdO88834 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShdO88834 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ShdO88834 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.21■□□□□ 0.83
ShdO88834 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.21■□□□□ 0.83
ShdO88834 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ShdO88834 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ShdO88834 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms