Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ClppO88696 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.22■□□□□ 0.67
ClppO88696 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.22■□□□□ 0.67
ClppO88696 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClppO88696 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClppO88696 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClppO88696 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClppO88696 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ClppO88696 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.21■□□□□ 0.67
ClppO88696 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
ClppO88696 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClppO88696 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ClppO88696 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.19■□□□□ 0.66
ClppO88696 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.19■□□□□ 0.66
ClppO88696 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ClppO88696 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.19■□□□□ 0.66
ClppO88696 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Spcs1-204ENSMUST00000226782 949 ntBASIC19.19■□□□□ 0.66
ClppO88696 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ClppO88696 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClppO88696 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ClppO88696 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ClppO88696 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClppO88696 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClppO88696 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.18■□□□□ 0.66
ClppO88696 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
ClppO88696 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
ClppO88696 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClppO88696 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
ClppO88696 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ClppO88696 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClppO88696 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ClppO88696 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.16■□□□□ 0.66
ClppO88696 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ClppO88696 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ClppO88696 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClppO88696 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClppO88696 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClppO88696 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
ClppO88696 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ClppO88696 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClppO88696 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClppO88696 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.15■□□□□ 0.66
ClppO88696 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ClppO88696 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClppO88696 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.15■□□□□ 0.66
ClppO88696 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClppO88696 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ClppO88696 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ClppO88696 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Gm12251-201ENSMUST00000117893 792 ntBASIC19.14■□□□□ 0.65
ClppO88696 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms