Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf17O88472 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf17O88472 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.53■□□□□ 0.56
Tnfrsf17O88472 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tnfrsf17O88472 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf17O88472 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf17O88472 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tnfrsf17O88472 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf17O88472 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf17O88472 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf17O88472 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.52■□□□□ 0.55
Tnfrsf17O88472 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf17O88472 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf17O88472 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf17O88472 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Tnfrsf17O88472 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf17O88472 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf17O88472 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf17O88472 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf17O88472 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf17O88472 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf17O88472 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.48■□□□□ 0.55
Tnfrsf17O88472 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf17O88472 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.48■□□□□ 0.55
Tnfrsf17O88472 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf17O88472 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf17O88472 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf17O88472 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf17O88472 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Gm6211-202ENSMUST00000167849 925 ntBASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf17O88472 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Gm13146-201ENSMUST00000118508 780 ntBASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms