Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ldb2O55203 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.77■□□□□ 0.75
Ldb2O55203 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.76■□□□□ 0.75
Ldb2O55203 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb2O55203 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb2O55203 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ldb2O55203 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ldb2O55203 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.75■□□□□ 0.75
Ldb2O55203 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb2O55203 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Ldb2O55203 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ldb2O55203 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ldb2O55203 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.74■□□□□ 0.75
Ldb2O55203 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.74■□□□□ 0.75
Ldb2O55203 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ldb2O55203 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ldb2O55203 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.74■□□□□ 0.75
Ldb2O55203 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ldb2O55203 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ldb2O55203 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb2O55203 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.73■□□□□ 0.75
Ldb2O55203 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb2O55203 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.73■□□□□ 0.75
Ldb2O55203 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb2O55203 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb2O55203 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ldb2O55203 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb2O55203 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb2O55203 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.73■□□□□ 0.75
Ldb2O55203 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.72■□□□□ 0.75
Ldb2O55203 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ldb2O55203 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.72■□□□□ 0.75
Ldb2O55203 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.72■□□□□ 0.75
Ldb2O55203 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ldb2O55203 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb2O55203 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ldb2O55203 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ldb2O55203 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.71■□□□□ 0.75
Ldb2O55203 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.71■□□□□ 0.75
Ldb2O55203 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.71■□□□□ 0.75
Ldb2O55203 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.71■□□□□ 0.75
Ldb2O55203 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb2O55203 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Ldb2O55203 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb2O55203 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb2O55203 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb2O55203 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb2O55203 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ldb2O55203 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb2O55203 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Ldb2O55203 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ldb2O55203 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 Notumos-201ENSMUST00000151998 2659 ntBASIC19.69■□□□□ 0.74
Ldb2O55203 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb2O55203 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ldb2O55203 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb2O55203 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb2O55203 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Ldb2O55203 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.68■□□□□ 0.74
Ldb2O55203 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb2O55203 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb2O55203 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb2O55203 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb2O55203 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms