Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx4O55187 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cbx4O55187 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cbx4O55187 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx4O55187 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx4O55187 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cbx4O55187 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cbx4O55187 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx4O55187 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx4O55187 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx4O55187 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx4O55187 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbx4O55187 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Cbx4O55187 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cbx4O55187 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.4■□□□□ 0.7
Cbx4O55187 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Cbx4O55187 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cbx4O55187 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cbx4O55187 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cbx4O55187 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.39■□□□□ 0.69
Cbx4O55187 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbx4O55187 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.38■□□□□ 0.69
Cbx4O55187 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbx4O55187 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cbx4O55187 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cbx4O55187 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbx4O55187 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cbx4O55187 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Cbx4O55187 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.36■□□□□ 0.69
Cbx4O55187 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cbx4O55187 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbx4O55187 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.35■□□□□ 0.69
Cbx4O55187 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cbx4O55187 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
Cbx4O55187 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
Cbx4O55187 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx4O55187 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx4O55187 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx4O55187 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx4O55187 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cbx4O55187 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
Cbx4O55187 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx4O55187 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx4O55187 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Cbx4O55187 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cbx4O55187 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.34■□□□□ 0.69
Cbx4O55187 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cbx4O55187 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cbx4O55187 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.33■□□□□ 0.69
Cbx4O55187 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cbx4O55187 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cbx4O55187 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.33■□□□□ 0.68
Cbx4O55187 Gm9847-201ENSMUST00000052528 599 ntBASIC19.33■□□□□ 0.68
Cbx4O55187 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx4O55187 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx4O55187 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx4O55187 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx4O55187 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx4O55187 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx4O55187 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbx4O55187 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cbx4O55187 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cbx4O55187 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx4O55187 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx4O55187 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx4O55187 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.31■□□□□ 0.68
Cbx4O55187 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cbx4O55187 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cbx4O55187 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx4O55187 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cbx4O55187 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx4O55187 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.3■□□□□ 0.68
Cbx4O55187 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx4O55187 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cbx4O55187 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.3■□□□□ 0.68
Cbx4O55187 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms