Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cntnap1O54991 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cntnap1O54991 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
Cntnap1O54991 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Cntnap1O54991 Gm9484-201ENSMUST00000195892 1159 ntBASIC26.3■■□□□ 1.8
Cntnap1O54991 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cntnap1O54991 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC26.3■■□□□ 1.8
Cntnap1O54991 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cntnap1O54991 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cntnap1O54991 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC26.29■■□□□ 1.8
Cntnap1O54991 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cntnap1O54991 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cntnap1O54991 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Cntnap1O54991 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cntnap1O54991 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cntnap1O54991 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cntnap1O54991 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cntnap1O54991 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Cntnap1O54991 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cntnap1O54991 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC26.28■■□□□ 1.8
Cntnap1O54991 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cntnap1O54991 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cntnap1O54991 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cntnap1O54991 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.28■■□□□ 1.8
Cntnap1O54991 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC26.27■■□□□ 1.8
Cntnap1O54991 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Cntnap1O54991 Gm37055-201ENSMUST00000191866 133 ntBASIC26.27■■□□□ 1.8
Cntnap1O54991 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cntnap1O54991 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cntnap1O54991 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cntnap1O54991 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cntnap1O54991 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cntnap1O54991 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cntnap1O54991 Gm13534-201ENSMUST00000121169 513 ntBASIC26.26■■□□□ 1.79
Cntnap1O54991 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cntnap1O54991 Gm9987-201ENSMUST00000069768 567 ntBASIC26.26■■□□□ 1.79
Cntnap1O54991 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Cntnap1O54991 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC26.26■■□□□ 1.79
Cntnap1O54991 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cntnap1O54991 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Cntnap1O54991 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cntnap1O54991 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cntnap1O54991 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Cntnap1O54991 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cntnap1O54991 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cntnap1O54991 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cntnap1O54991 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cntnap1O54991 Gm38205-201ENSMUST00000192243 258 ntBASIC26.24■■□□□ 1.79
Cntnap1O54991 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cntnap1O54991 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cntnap1O54991 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cntnap1O54991 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cntnap1O54991 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.23■■□□□ 1.79
Cntnap1O54991 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cntnap1O54991 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cntnap1O54991 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cntnap1O54991 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cntnap1O54991 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Cntnap1O54991 Gm12896-201ENSMUST00000118430 226 ntBASIC26.21■■□□□ 1.79
Cntnap1O54991 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC26.21■■□□□ 1.79
Cntnap1O54991 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC26.21■■□□□ 1.79
Cntnap1O54991 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cntnap1O54991 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC26.21■■□□□ 1.79
Cntnap1O54991 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC26.2■■□□□ 1.79
Cntnap1O54991 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC26.2■■□□□ 1.79
Cntnap1O54991 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.2■■□□□ 1.79
Cntnap1O54991 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Cntnap1O54991 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.2■■□□□ 1.78
Cntnap1O54991 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cntnap1O54991 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
Cntnap1O54991 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Cntnap1O54991 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cntnap1O54991 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cntnap1O54991 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC26.19■■□□□ 1.78
Cntnap1O54991 Mir6236-201ENSMUST00000184437 123 ntBASIC26.19■■□□□ 1.78
Cntnap1O54991 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Cntnap1O54991 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cntnap1O54991 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Cntnap1O54991 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cntnap1O54991 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cntnap1O54991 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC26.18■■□□□ 1.78
Cntnap1O54991 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cntnap1O54991 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cntnap1O54991 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cntnap1O54991 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.17■■□□□ 1.78
Cntnap1O54991 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cntnap1O54991 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cntnap1O54991 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cntnap1O54991 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Cntnap1O54991 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms