Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.67■□□□□ 0.9
Per2O54943 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.67■□□□□ 0.9
Per2O54943 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Per2O54943 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Per2O54943 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.67■□□□□ 0.9
Per2O54943 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Per2O54943 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Per2O54943 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Per2O54943 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Per2O54943 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Per2O54943 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Per2O54943 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Per2O54943 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Per2O54943 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Per2O54943 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Per2O54943 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Per2O54943 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Per2O54943 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Per2O54943 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Per2O54943 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.65■□□□□ 0.9
Per2O54943 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Per2O54943 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Per2O54943 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.64■□□□□ 0.9
Per2O54943 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Per2O54943 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Per2O54943 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Per2O54943 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Per2O54943 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Per2O54943 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Per2O54943 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Per2O54943 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.63■□□□□ 0.89
Per2O54943 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Per2O54943 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.63■□□□□ 0.89
Per2O54943 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.63■□□□□ 0.89
Per2O54943 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Per2O54943 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Per2O54943 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Per2O54943 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.62■□□□□ 0.89
Per2O54943 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Per2O54943 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Per2O54943 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Per2O54943 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Per2O54943 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Per2O54943 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.61■□□□□ 0.89
Per2O54943 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Per2O54943 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.61■□□□□ 0.89
Per2O54943 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Per2O54943 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Per2O54943 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Per2O54943 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Per2O54943 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Per2O54943 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Per2O54943 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Per2O54943 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Per2O54943 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Per2O54943 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Per2O54943 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Per2O54943 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Per2O54943 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.59■□□□□ 0.89
Per2O54943 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Per2O54943 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
Per2O54943 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.59■□□□□ 0.89
Per2O54943 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Per2O54943 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Per2O54943 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Per2O54943 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Per2O54943 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Per2O54943 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Per2O54943 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Per2O54943 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Per2O54943 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Per2O54943 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.58■□□□□ 0.89
Per2O54943 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.58■□□□□ 0.89
Per2O54943 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Per2O54943 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Per2O54943 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Per2O54943 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Per2O54943 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Per2O54943 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Per2O54943 Gm12922-201ENSMUST00000120626 809 ntBASIC20.56■□□□□ 0.88
Per2O54943 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Per2O54943 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Per2O54943 Golgb1-201ENSMUST00000023534 498 ntBASIC20.56■□□□□ 0.88
Per2O54943 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Per2O54943 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Per2O54943 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Per2O54943 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Per2O54943 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Per2O54943 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.55■□□□□ 0.88
Per2O54943 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.55■□□□□ 0.88
Per2O54943 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.55■□□□□ 0.88
Per2O54943 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Per2O54943 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms