Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn5O54942 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cldn5O54942 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.66■□□□□ 0.9
Cldn5O54942 Gm43060-201ENSMUST00000200621 289 ntBASIC20.66■□□□□ 0.9
Cldn5O54942 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.66■□□□□ 0.9
Cldn5O54942 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn5O54942 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn5O54942 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn5O54942 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn5O54942 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn5O54942 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn5O54942 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn5O54942 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn5O54942 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn5O54942 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn5O54942 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Cldn5O54942 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cldn5O54942 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cldn5O54942 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn5O54942 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn5O54942 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn5O54942 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cldn5O54942 Gm18284-201ENSMUST00000172604 624 ntBASIC20.62■□□□□ 0.89
Cldn5O54942 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn5O54942 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn5O54942 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn5O54942 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn5O54942 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cldn5O54942 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn5O54942 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn5O54942 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn5O54942 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cldn5O54942 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn5O54942 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn5O54942 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.61■□□□□ 0.89
Cldn5O54942 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn5O54942 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn5O54942 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cldn5O54942 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cldn5O54942 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.6■□□□□ 0.89
Cldn5O54942 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn5O54942 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn5O54942 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cldn5O54942 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn5O54942 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn5O54942 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.6■□□□□ 0.89
Cldn5O54942 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn5O54942 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn5O54942 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cldn5O54942 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn5O54942 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.59■□□□□ 0.89
Cldn5O54942 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.59■□□□□ 0.89
Cldn5O54942 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn5O54942 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn5O54942 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cldn5O54942 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn5O54942 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cldn5O54942 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.59■□□□□ 0.89
Cldn5O54942 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cldn5O54942 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn5O54942 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn5O54942 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn5O54942 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cldn5O54942 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.58■□□□□ 0.89
Cldn5O54942 Gm11421-201ENSMUST00000122124 294 ntBASIC20.58■□□□□ 0.89
Cldn5O54942 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn5O54942 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.58■□□□□ 0.88
Cldn5O54942 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn5O54942 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn5O54942 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn5O54942 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.57■□□□□ 0.88
Cldn5O54942 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn5O54942 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.57■□□□□ 0.88
Cldn5O54942 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.57■□□□□ 0.88
Cldn5O54942 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn5O54942 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.57■□□□□ 0.88
Cldn5O54942 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cldn5O54942 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn5O54942 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn5O54942 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn5O54942 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn5O54942 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn5O54942 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms