Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Per1O35973 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Per1O35973 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.69■■□□□ 1.06
Per1O35973 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Per1O35973 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Per1O35973 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Per1O35973 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Per1O35973 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Per1O35973 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per1O35973 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per1O35973 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per1O35973 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per1O35973 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Per1O35973 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Per1O35973 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.67■■□□□ 1.06
Per1O35973 Gm11421-201ENSMUST00000122124 294 ntBASIC21.67■■□□□ 1.06
Per1O35973 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.67■■□□□ 1.06
Per1O35973 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.67■■□□□ 1.06
Per1O35973 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.66■■□□□ 1.06
Per1O35973 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.66■■□□□ 1.06
Per1O35973 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per1O35973 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per1O35973 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Per1O35973 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Per1O35973 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per1O35973 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.66■■□□□ 1.06
Per1O35973 Gm40848-201ENSMUST00000221998 324 ntBASIC21.66■■□□□ 1.06
Per1O35973 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per1O35973 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per1O35973 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Per1O35973 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per1O35973 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per1O35973 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per1O35973 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Per1O35973 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Per1O35973 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per1O35973 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Per1O35973 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per1O35973 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Per1O35973 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Per1O35973 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Per1O35973 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.64■■□□□ 1.05
Per1O35973 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Per1O35973 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Per1O35973 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Per1O35973 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per1O35973 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.63■■□□□ 1.05
Per1O35973 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.63■■□□□ 1.05
Per1O35973 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per1O35973 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per1O35973 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Per1O35973 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.63■■□□□ 1.05
Per1O35973 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per1O35973 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Per1O35973 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per1O35973 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per1O35973 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.62■■□□□ 1.05
Per1O35973 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.62■■□□□ 1.05
Per1O35973 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.62■■□□□ 1.05
Per1O35973 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Per1O35973 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per1O35973 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Per1O35973 AA386476-201ENSMUST00000098781 1665 ntBASIC21.61■■□□□ 1.05
Per1O35973 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Per1O35973 Gm18284-201ENSMUST00000172604 624 ntBASIC21.61■■□□□ 1.05
Per1O35973 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Per1O35973 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Per1O35973 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per1O35973 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per1O35973 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.6■■□□□ 1.05
Per1O35973 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per1O35973 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.6■■□□□ 1.05
Per1O35973 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per1O35973 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Per1O35973 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Per1O35973 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.59■■□□□ 1.05
Per1O35973 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Per1O35973 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Per1O35973 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Per1O35973 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Per1O35973 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Per1O35973 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms