Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm2O35900 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm2O35900 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.67■□□□□ 0.42
Lsm2O35900 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm2O35900 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.67■□□□□ 0.42
Lsm2O35900 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lsm2O35900 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm2O35900 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.67■□□□□ 0.42
Lsm2O35900 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm2O35900 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm2O35900 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.67■□□□□ 0.42
Lsm2O35900 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm2O35900 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm2O35900 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm2O35900 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm2O35900 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm2O35900 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.66■□□□□ 0.42
Lsm2O35900 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm2O35900 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm2O35900 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm2O35900 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm2O35900 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm2O35900 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lsm2O35900 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lsm2O35900 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.65■□□□□ 0.42
Lsm2O35900 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lsm2O35900 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lsm2O35900 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm2O35900 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
Lsm2O35900 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm2O35900 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.64■□□□□ 0.41
Lsm2O35900 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.64■□□□□ 0.41
Lsm2O35900 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm2O35900 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm2O35900 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lsm2O35900 Gm10420-201ENSMUST00000121713 882 ntBASIC17.63■□□□□ 0.41
Lsm2O35900 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.63■□□□□ 0.41
Lsm2O35900 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm2O35900 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm2O35900 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm2O35900 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.61■□□□□ 0.41
Lsm2O35900 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lsm2O35900 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.61■□□□□ 0.41
Lsm2O35900 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Lsm2O35900 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.61■□□□□ 0.41
Lsm2O35900 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm2O35900 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.6■□□□□ 0.41
Lsm2O35900 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lsm2O35900 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms