Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1O35604 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.32■□□□□ 0.68
Npc1O35604 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1O35604 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Npc1O35604 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Npc1O35604 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.32■□□□□ 0.68
Npc1O35604 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1O35604 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.32■□□□□ 0.68
Npc1O35604 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1O35604 Serp2-204ENSMUST00000228055 705 ntBASIC19.32■□□□□ 0.68
Npc1O35604 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1O35604 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1O35604 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Npc1O35604 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Npc1O35604 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1O35604 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Npc1O35604 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1O35604 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1O35604 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1O35604 Gm8493-201ENSMUST00000196881 489 ntBASIC19.31■□□□□ 0.68
Npc1O35604 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1O35604 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Npc1O35604 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.3■□□□□ 0.68
Npc1O35604 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.3■□□□□ 0.68
Npc1O35604 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Npc1O35604 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Npc1O35604 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1O35604 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Npc1O35604 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.29■□□□□ 0.68
Npc1O35604 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1O35604 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.29■□□□□ 0.68
Npc1O35604 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Npc1O35604 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1O35604 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Npc1O35604 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Npc1O35604 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Npc1O35604 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Npc1O35604 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1O35604 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1O35604 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1O35604 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Npc1O35604 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.28■□□□□ 0.68
Npc1O35604 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.28■□□□□ 0.68
Npc1O35604 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1O35604 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1O35604 Spcs1-204ENSMUST00000226782 949 ntBASIC19.28■□□□□ 0.68
Npc1O35604 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Npc1O35604 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Npc1O35604 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1O35604 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Npc1O35604 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Npc1O35604 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Npc1O35604 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Npc1O35604 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1O35604 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1O35604 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1O35604 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1O35604 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1O35604 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Npc1O35604 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Npc1O35604 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Npc1O35604 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
Npc1O35604 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Npc1O35604 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.26■□□□□ 0.67
Npc1O35604 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Npc1O35604 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.25■□□□□ 0.67
Npc1O35604 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.25■□□□□ 0.67
Npc1O35604 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Npc1O35604 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npc1O35604 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1O35604 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Npc1O35604 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1O35604 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1O35604 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1O35604 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.24■□□□□ 0.67
Npc1O35604 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Npc1O35604 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms