Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptch2O35595 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.37■□□□□ 0.85
Ptch2O35595 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptch2O35595 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptch2O35595 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptch2O35595 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptch2O35595 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ptch2O35595 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.36■□□□□ 0.85
Ptch2O35595 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.36■□□□□ 0.85
Ptch2O35595 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ptch2O35595 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Ptch2O35595 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.36■□□□□ 0.85
Ptch2O35595 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 Gm11421-201ENSMUST00000122124 294 ntBASIC20.35■□□□□ 0.85
Ptch2O35595 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ptch2O35595 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ptch2O35595 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.35■□□□□ 0.85
Ptch2O35595 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptch2O35595 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.34■□□□□ 0.85
Ptch2O35595 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptch2O35595 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ptch2O35595 Mir6236-201ENSMUST00000184437 123 ntBASIC20.34■□□□□ 0.85
Ptch2O35595 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ptch2O35595 Gm37179-201ENSMUST00000194862 823 ntBASIC20.34■□□□□ 0.85
Ptch2O35595 Gm10033-202ENSMUST00000211874 928 ntBASIC20.34■□□□□ 0.85
Ptch2O35595 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptch2O35595 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptch2O35595 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptch2O35595 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptch2O35595 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ptch2O35595 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptch2O35595 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptch2O35595 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptch2O35595 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.33■□□□□ 0.85
Ptch2O35595 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ptch2O35595 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ptch2O35595 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ptch2O35595 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ptch2O35595 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ptch2O35595 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptch2O35595 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptch2O35595 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptch2O35595 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptch2O35595 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ptch2O35595 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.32■□□□□ 0.84
Ptch2O35595 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptch2O35595 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptch2O35595 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptch2O35595 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.31■□□□□ 0.84
Ptch2O35595 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptch2O35595 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptch2O35595 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ptch2O35595 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptch2O35595 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.31■□□□□ 0.84
Ptch2O35595 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptch2O35595 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ptch2O35595 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptch2O35595 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ptch2O35595 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Ptch2O35595 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptch2O35595 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptch2O35595 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.3■□□□□ 0.84
Ptch2O35595 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ptch2O35595 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptch2O35595 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptch2O35595 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptch2O35595 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptch2O35595 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptch2O35595 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptch2O35595 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptch2O35595 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptch2O35595 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ptch2O35595 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.28■□□□□ 0.84
Ptch2O35595 Gm18671-201ENSMUST00000214826 683 ntBASIC20.28■□□□□ 0.84
Ptch2O35595 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptch2O35595 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptch2O35595 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptch2O35595 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptch2O35595 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptch2O35595 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptch2O35595 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ptch2O35595 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.27■□□□□ 0.84
Ptch2O35595 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptch2O35595 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptch2O35595 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ptch2O35595 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptch2O35595 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ptch2O35595 AV356131-201ENSMUST00000206201 750 ntBASIC20.27■□□□□ 0.84
Ptch2O35595 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ptch2O35595 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptch2O35595 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptch2O35595 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ptch2O35595 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ptch2O35595 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms