Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc1a6O35544 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc1a6O35544 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc1a6O35544 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc1a6O35544 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc1a6O35544 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc1a6O35544 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.54■□□□□ 0.72
Slc1a6O35544 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc1a6O35544 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc1a6O35544 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc1a6O35544 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc1a6O35544 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc1a6O35544 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc1a6O35544 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.53■□□□□ 0.72
Slc1a6O35544 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.53■□□□□ 0.72
Slc1a6O35544 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Slc1a6O35544 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc1a6O35544 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc1a6O35544 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc1a6O35544 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc1a6O35544 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc1a6O35544 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc1a6O35544 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc1a6O35544 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc1a6O35544 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc1a6O35544 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Slc1a6O35544 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Slc1a6O35544 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Slc1a6O35544 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.52■□□□□ 0.72
Slc1a6O35544 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Slc1a6O35544 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc1a6O35544 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc1a6O35544 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.51■□□□□ 0.71
Slc1a6O35544 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Slc1a6O35544 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc1a6O35544 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc1a6O35544 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc1a6O35544 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.5■□□□□ 0.71
Slc1a6O35544 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc1a6O35544 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc1a6O35544 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.5■□□□□ 0.71
Slc1a6O35544 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.5■□□□□ 0.71
Slc1a6O35544 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc1a6O35544 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc1a6O35544 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc1a6O35544 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc1a6O35544 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc1a6O35544 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc1a6O35544 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc1a6O35544 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc1a6O35544 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc1a6O35544 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.48■□□□□ 0.71
Slc1a6O35544 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a6O35544 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Slc1a6O35544 Gm43566-201ENSMUST00000196851 808 ntBASIC19.48■□□□□ 0.71
Slc1a6O35544 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a6O35544 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a6O35544 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a6O35544 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slc1a6O35544 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.48■□□□□ 0.71
Slc1a6O35544 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc1a6O35544 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc1a6O35544 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.47■□□□□ 0.71
Slc1a6O35544 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc1a6O35544 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc1a6O35544 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Slc1a6O35544 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Slc1a6O35544 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc1a6O35544 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc1a6O35544 Gm13238-201ENSMUST00000117655 780 ntBASIC19.46■□□□□ 0.71
Slc1a6O35544 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.46■□□□□ 0.71
Slc1a6O35544 Mir6236-201ENSMUST00000184437 123 ntBASIC19.46■□□□□ 0.71
Slc1a6O35544 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a6O35544 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a6O35544 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a6O35544 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Slc1a6O35544 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc1a6O35544 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a6O35544 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Slc1a6O35544 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a6O35544 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a6O35544 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc1a6O35544 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc1a6O35544 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a6O35544 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a6O35544 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc1a6O35544 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a6O35544 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a6O35544 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a6O35544 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a6O35544 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms