Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.91■□□□□ 0.62
Clk4O35493 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.91■□□□□ 0.62
Clk4O35493 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.91■□□□□ 0.62
Clk4O35493 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Clk4O35493 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clk4O35493 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk4O35493 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk4O35493 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clk4O35493 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clk4O35493 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.9■□□□□ 0.62
Clk4O35493 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clk4O35493 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk4O35493 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.9■□□□□ 0.62
Clk4O35493 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk4O35493 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clk4O35493 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Clk4O35493 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Clk4O35493 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
Clk4O35493 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Golph3-202ENSMUST00000226517 2359 ntBASIC18.89■□□□□ 0.61
Clk4O35493 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk4O35493 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Clk4O35493 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
Clk4O35493 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.88■□□□□ 0.61
Clk4O35493 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Clk4O35493 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
Clk4O35493 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk4O35493 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Clk4O35493 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Clk4O35493 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.87■□□□□ 0.61
Clk4O35493 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk4O35493 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk4O35493 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk4O35493 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk4O35493 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk4O35493 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk4O35493 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk4O35493 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk4O35493 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clk4O35493 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clk4O35493 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.86■□□□□ 0.61
Clk4O35493 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk4O35493 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clk4O35493 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.86■□□□□ 0.61
Clk4O35493 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.86■□□□□ 0.61
Clk4O35493 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.86■□□□□ 0.61
Clk4O35493 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.86■□□□□ 0.61
Clk4O35493 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk4O35493 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Clk4O35493 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Clk4O35493 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.85■□□□□ 0.61
Clk4O35493 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk4O35493 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk4O35493 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clk4O35493 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk4O35493 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clk4O35493 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Clk4O35493 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.84■□□□□ 0.61
Clk4O35493 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.84■□□□□ 0.61
Clk4O35493 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Clk4O35493 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.84■□□□□ 0.61
Clk4O35493 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.83■□□□□ 0.61
Clk4O35493 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk4O35493 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk4O35493 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk4O35493 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clk4O35493 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk4O35493 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Clk4O35493 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk4O35493 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clk4O35493 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk4O35493 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms