Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.11■□□□□ 0.33
Atf6bO35451 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.11■□□□□ 0.33
Atf6bO35451 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Atf6bO35451 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6bO35451 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6bO35451 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6bO35451 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atf6bO35451 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Atf6bO35451 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6bO35451 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6bO35451 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6bO35451 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.09■□□□□ 0.33
Atf6bO35451 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6bO35451 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6bO35451 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6bO35451 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6bO35451 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.09■□□□□ 0.33
Atf6bO35451 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6bO35451 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6bO35451 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Atf6bO35451 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6bO35451 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Atf6bO35451 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6bO35451 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6bO35451 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6bO35451 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6bO35451 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6bO35451 Gm12821-201ENSMUST00000120022 600 ntBASIC17.08■□□□□ 0.32
Atf6bO35451 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6bO35451 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.08■□□□□ 0.32
Atf6bO35451 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Atf6bO35451 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.07■□□□□ 0.32
Atf6bO35451 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Atf6bO35451 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6bO35451 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Atf6bO35451 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atf6bO35451 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Atf6bO35451 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Atf6bO35451 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Atf6bO35451 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atf6bO35451 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6bO35451 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.06■□□□□ 0.32
Atf6bO35451 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Gm27454-201ENSMUST00000185090 204 ntBASIC17.05■□□□□ 0.32
Atf6bO35451 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.05■□□□□ 0.32
Atf6bO35451 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.05■□□□□ 0.32
Atf6bO35451 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.05■□□□□ 0.32
Atf6bO35451 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6bO35451 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Atf6bO35451 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.04■□□□□ 0.32
Atf6bO35451 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.04■□□□□ 0.32
Atf6bO35451 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.04■□□□□ 0.32
Atf6bO35451 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Atf6bO35451 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Atf6bO35451 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.04■□□□□ 0.32
Atf6bO35451 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms