Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.83□□□□□ -0.36
Pkd1O08852 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pkd1O08852 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.83□□□□□ -0.36
Pkd1O08852 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pkd1O08852 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pkd1O08852 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.82□□□□□ -0.36
Pkd1O08852 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.82□□□□□ -0.36
Pkd1O08852 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pkd1O08852 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Pkd1O08852 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Gm7290-201ENSMUST00000104990 617 ntBASIC12.82□□□□□ -0.36
Pkd1O08852 Gm12918-201ENSMUST00000120234 636 ntBASIC12.82□□□□□ -0.36
Pkd1O08852 Gm15710-201ENSMUST00000121821 636 ntBASIC12.82□□□□□ -0.36
Pkd1O08852 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.82□□□□□ -0.36
Pkd1O08852 Gm5075-201ENSMUST00000196916 622 ntBASIC12.82□□□□□ -0.36
Pkd1O08852 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.82□□□□□ -0.36
Pkd1O08852 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.82□□□□□ -0.36
Pkd1O08852 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.82□□□□□ -0.36
Pkd1O08852 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pkd1O08852 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC12.82□□□□□ -0.36
Pkd1O08852 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.82□□□□□ -0.36
Pkd1O08852 Gm13836-201ENSMUST00000121159 501 ntBASIC12.82□□□□□ -0.36
Pkd1O08852 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pkd1O08852 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 Gm6365-201ENSMUST00000054711 744 ntBASIC12.81□□□□□ -0.36
Pkd1O08852 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pkd1O08852 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pkd1O08852 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC12.81□□□□□ -0.36
Pkd1O08852 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.81□□□□□ -0.36
Pkd1O08852 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pkd1O08852 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Gm6420-201ENSMUST00000193885 723 ntBASIC12.8□□□□□ -0.36
Pkd1O08852 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.8□□□□□ -0.36
Pkd1O08852 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.8□□□□□ -0.36
Pkd1O08852 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pkd1O08852 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.8□□□□□ -0.36
Pkd1O08852 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.8□□□□□ -0.36
Pkd1O08852 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Gm10812-201ENSMUST00000099864 546 ntBASIC12.8□□□□□ -0.36
Pkd1O08852 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pkd1O08852 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pkd1O08852 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.79□□□□□ -0.36
Pkd1O08852 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.79□□□□□ -0.36
Pkd1O08852 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.79□□□□□ -0.36
Pkd1O08852 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pkd1O08852 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pkd1O08852 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pkd1O08852 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Pkd1O08852 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pkd1O08852 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC12.78□□□□□ -0.36
Pkd1O08852 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pkd1O08852 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pkd1O08852 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pkd1O08852 Gm38205-201ENSMUST00000192243 258 ntBASIC12.78□□□□□ -0.36
Pkd1O08852 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pkd1O08852 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pkd1O08852 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pkd1O08852 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pkd1O08852 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.78□□□□□ -0.36
Pkd1O08852 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.77□□□□□ -0.36
Pkd1O08852 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pkd1O08852 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms