Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ercc2O08811 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.34■□□□□ 0.85
Ercc2O08811 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Ercc2O08811 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ercc2O08811 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ercc2O08811 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ercc2O08811 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ercc2O08811 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ercc2O08811 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.33■□□□□ 0.85
Ercc2O08811 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.33■□□□□ 0.85
Ercc2O08811 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ercc2O08811 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ercc2O08811 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ercc2O08811 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Ercc2O08811 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ercc2O08811 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ercc2O08811 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ercc2O08811 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ercc2O08811 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ercc2O08811 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ercc2O08811 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.32■□□□□ 0.84
Ercc2O08811 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ercc2O08811 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc2O08811 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ercc2O08811 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc2O08811 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ercc2O08811 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.31■□□□□ 0.84
Ercc2O08811 Gm43137-201ENSMUST00000198052 594 ntBASIC20.31■□□□□ 0.84
Ercc2O08811 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ercc2O08811 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.31■□□□□ 0.84
Ercc2O08811 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ercc2O08811 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ercc2O08811 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc2O08811 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc2O08811 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ercc2O08811 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc2O08811 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.3■□□□□ 0.84
Ercc2O08811 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc2O08811 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc2O08811 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc2O08811 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ercc2O08811 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ercc2O08811 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc2O08811 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ercc2O08811 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Ercc2O08811 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc2O08811 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc2O08811 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ercc2O08811 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc2O08811 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc2O08811 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc2O08811 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ercc2O08811 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ercc2O08811 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.28■□□□□ 0.84
Ercc2O08811 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ercc2O08811 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ercc2O08811 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ercc2O08811 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ercc2O08811 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.28■□□□□ 0.84
Ercc2O08811 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ercc2O08811 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.28■□□□□ 0.84
Ercc2O08811 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ercc2O08811 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ercc2O08811 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ercc2O08811 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ercc2O08811 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ercc2O08811 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ercc2O08811 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ercc2O08811 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ercc2O08811 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ercc2O08811 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ercc2O08811 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Ercc2O08811 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc2O08811 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc2O08811 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc2O08811 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ercc2O08811 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc2O08811 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.26■□□□□ 0.83
Ercc2O08811 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc2O08811 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ercc2O08811 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.26■□□□□ 0.83
Ercc2O08811 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ercc2O08811 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ercc2O08811 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.25■□□□□ 0.83
Ercc2O08811 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ercc2O08811 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ercc2O08811 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ercc2O08811 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc2O08811 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.24■□□□□ 0.83
Ercc2O08811 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc2O08811 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.24■□□□□ 0.83
Ercc2O08811 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc2O08811 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms