Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Raet1cO08604 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Raet1cO08604 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Raet1cO08604 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Raet1cO08604 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Raet1cO08604 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.68■□□□□ 0.42
Raet1cO08604 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.68■□□□□ 0.42
Raet1cO08604 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Raet1cO08604 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Raet1cO08604 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Raet1cO08604 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Raet1cO08604 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Raet1cO08604 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Raet1cO08604 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Raet1cO08604 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Raet1cO08604 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Raet1cO08604 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Raet1cO08604 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Raet1cO08604 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Raet1cO08604 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Raet1cO08604 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Raet1cO08604 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Raet1cO08604 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raet1cO08604 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raet1cO08604 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Raet1cO08604 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.66■□□□□ 0.42
Raet1cO08604 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.66■□□□□ 0.42
Raet1cO08604 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raet1cO08604 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Raet1cO08604 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Raet1cO08604 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.65■□□□□ 0.42
Raet1cO08604 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.65■□□□□ 0.42
Raet1cO08604 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.65■□□□□ 0.42
Raet1cO08604 Golgb1-201ENSMUST00000023534 498 ntBASIC17.65■□□□□ 0.42
Raet1cO08604 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Raet1cO08604 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.65■□□□□ 0.42
Raet1cO08604 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Raet1cO08604 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Raet1cO08604 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Raet1cO08604 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Gm12922-201ENSMUST00000120626 809 ntBASIC17.64■□□□□ 0.41
Raet1cO08604 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Raet1cO08604 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raet1cO08604 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Raet1cO08604 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raet1cO08604 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.63■□□□□ 0.41
Raet1cO08604 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raet1cO08604 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raet1cO08604 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.63■□□□□ 0.41
Raet1cO08604 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Raet1cO08604 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Raet1cO08604 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Raet1cO08604 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Raet1cO08604 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Raet1cO08604 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Raet1cO08604 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raet1cO08604 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.61■□□□□ 0.41
Raet1cO08604 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.61■□□□□ 0.41
Raet1cO08604 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Raet1cO08604 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raet1cO08604 Golph3-202ENSMUST00000226517 2359 ntBASIC17.61■□□□□ 0.41
Raet1cO08604 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raet1cO08604 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raet1cO08604 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Raet1cO08604 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms