Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1bO08603 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.58■□□□□ 0.4
Raet1bO08603 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1bO08603 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.58■□□□□ 0.4
Raet1bO08603 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1bO08603 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1bO08603 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1bO08603 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1bO08603 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1bO08603 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1bO08603 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1bO08603 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Raet1bO08603 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1bO08603 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1bO08603 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Raet1bO08603 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1bO08603 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1bO08603 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1bO08603 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1bO08603 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Raet1bO08603 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.56■□□□□ 0.4
Raet1bO08603 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1bO08603 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1bO08603 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1bO08603 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.55■□□□□ 0.4
Raet1bO08603 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1bO08603 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1bO08603 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1bO08603 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.55■□□□□ 0.4
Raet1bO08603 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.55■□□□□ 0.4
Raet1bO08603 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Raet1bO08603 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1bO08603 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1bO08603 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Raet1bO08603 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1bO08603 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1bO08603 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1bO08603 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.54■□□□□ 0.4
Raet1bO08603 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.53■□□□□ 0.4
Raet1bO08603 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1bO08603 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1bO08603 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Raet1bO08603 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1bO08603 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1bO08603 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1bO08603 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Raet1bO08603 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1bO08603 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1bO08603 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1bO08603 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1bO08603 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.52■□□□□ 0.4
Raet1bO08603 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.52■□□□□ 0.4
Raet1bO08603 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.52■□□□□ 0.4
Raet1bO08603 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Raet1bO08603 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Raet1bO08603 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Raet1bO08603 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Raet1bO08603 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.51■□□□□ 0.39
Raet1bO08603 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Raet1bO08603 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Raet1bO08603 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1bO08603 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1bO08603 Gm9847-201ENSMUST00000052528 599 ntBASIC17.5■□□□□ 0.39
Raet1bO08603 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1bO08603 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Raet1bO08603 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1bO08603 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.49■□□□□ 0.39
Raet1bO08603 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.49■□□□□ 0.39
Raet1bO08603 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.49■□□□□ 0.39
Raet1bO08603 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.49■□□□□ 0.39
Raet1bO08603 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Raet1bO08603 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Raet1bO08603 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1bO08603 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.48■□□□□ 0.39
Raet1bO08603 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.48■□□□□ 0.39
Raet1bO08603 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms