Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp72F8VQC1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Srp72F8VQC1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp72F8VQC1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Srp72F8VQC1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp72F8VQC1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp72F8VQC1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Srp72F8VQC1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp72F8VQC1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp72F8VQC1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Srp72F8VQC1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp72F8VQC1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.39■□□□□ 0.69
Srp72F8VQC1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.39■□□□□ 0.69
Srp72F8VQC1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp72F8VQC1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Srp72F8VQC1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.38■□□□□ 0.69
Srp72F8VQC1 Gm15820-201ENSMUST00000201566 728 ntBASIC19.38■□□□□ 0.69
Srp72F8VQC1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Gm5812-201ENSMUST00000061073 957 ntBASIC19.38■□□□□ 0.69
Srp72F8VQC1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp72F8VQC1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp72F8VQC1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp72F8VQC1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Srp72F8VQC1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Srp72F8VQC1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srp72F8VQC1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.34■□□□□ 0.69
Srp72F8VQC1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srp72F8VQC1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srp72F8VQC1 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.34■□□□□ 0.69
Srp72F8VQC1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srp72F8VQC1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srp72F8VQC1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srp72F8VQC1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.33■□□□□ 0.69
Srp72F8VQC1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srp72F8VQC1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.33■□□□□ 0.69
Srp72F8VQC1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.33■□□□□ 0.68
Srp72F8VQC1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms