Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.37■□□□□ 0.85
Atf6F6VAN0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6F6VAN0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6F6VAN0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6F6VAN0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6F6VAN0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6F6VAN0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf6F6VAN0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf6F6VAN0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atf6F6VAN0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Atf6F6VAN0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Atf6F6VAN0 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.35■□□□□ 0.85
Atf6F6VAN0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.35■□□□□ 0.85
Atf6F6VAN0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf6F6VAN0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf6F6VAN0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atf6F6VAN0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atf6F6VAN0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atf6F6VAN0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.33■□□□□ 0.85
Atf6F6VAN0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Atf6F6VAN0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atf6F6VAN0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.33■□□□□ 0.85
Atf6F6VAN0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.33■□□□□ 0.85
Atf6F6VAN0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atf6F6VAN0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atf6F6VAN0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6F6VAN0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Golgb1-201ENSMUST00000023534 498 ntBASIC20.32■□□□□ 0.84
Atf6F6VAN0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Atf6F6VAN0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Atf6F6VAN0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atf6F6VAN0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.29■□□□□ 0.84
Atf6F6VAN0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Gm12922-201ENSMUST00000120626 809 ntBASIC20.29■□□□□ 0.84
Atf6F6VAN0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atf6F6VAN0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf6F6VAN0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf6F6VAN0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Atf6F6VAN0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf6F6VAN0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf6F6VAN0 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.28■□□□□ 0.84
Atf6F6VAN0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf6F6VAN0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.28■□□□□ 0.84
Atf6F6VAN0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf6F6VAN0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms