Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.86■□□□□ 0.45
Gm3543D3Z235 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.86■□□□□ 0.45
Gm3543D3Z235 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm3543D3Z235 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.85■□□□□ 0.45
Gm3543D3Z235 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3543D3Z235 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm3543D3Z235 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3543D3Z235 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3543D3Z235 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3543D3Z235 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.83■□□□□ 0.45
Gm3543D3Z235 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.83■□□□□ 0.45
Gm3543D3Z235 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3543D3Z235 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3543D3Z235 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3543D3Z235 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3543D3Z235 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.81■□□□□ 0.44
Gm3543D3Z235 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm3543D3Z235 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Mir7075-201ENSMUST00000184187 82 ntBASIC17.8■□□□□ 0.44
Gm3543D3Z235 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3543D3Z235 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3543D3Z235 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3543D3Z235 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms