Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp27D3YV89 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Etf1-202ENSMUST00000180351 108 ntBASIC16.62■□□□□ 0.25
Mmp27D3YV89 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp27D3YV89 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Mmp27D3YV89 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.6■□□□□ 0.25
Mmp27D3YV89 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Gm45102-201ENSMUST00000207427 857 ntBASIC16.6■□□□□ 0.25
Mmp27D3YV89 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Gm9959-201ENSMUST00000068277 390 ntBASIC16.6■□□□□ 0.25
Mmp27D3YV89 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Grk6-206ENSMUST00000224995 2971 ntBASIC16.6■□□□□ 0.25
Mmp27D3YV89 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.6■□□□□ 0.25
Mmp27D3YV89 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp27D3YV89 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.59■□□□□ 0.25
Mmp27D3YV89 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.59■□□□□ 0.25
Mmp27D3YV89 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp27D3YV89 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.59■□□□□ 0.25
Mmp27D3YV89 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp27D3YV89 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Mmp27D3YV89 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp27D3YV89 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Mmp27D3YV89 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp27D3YV89 Gm14117-201ENSMUST00000122417 843 ntBASIC16.58■□□□□ 0.24
Mmp27D3YV89 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.58■□□□□ 0.24
Mmp27D3YV89 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp27D3YV89 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp27D3YV89 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp27D3YV89 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp27D3YV89 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp27D3YV89 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Mmp27D3YV89 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Mmp27D3YV89 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms