Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn1aA2APX8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Scn1aA2APX8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.01■□□□□ 0.95
Scn1aA2APX8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Scn1aA2APX8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn1aA2APX8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Scn1aA2APX8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn1aA2APX8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn1aA2APX8 Gm11421-201ENSMUST00000122124 294 ntBASIC21■□□□□ 0.95
Scn1aA2APX8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21■□□□□ 0.95
Scn1aA2APX8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Scn1aA2APX8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn1aA2APX8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn1aA2APX8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Gm26571-201ENSMUST00000181399 666 ntBASIC20.99■□□□□ 0.95
Scn1aA2APX8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn1aA2APX8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.98■□□□□ 0.95
Scn1aA2APX8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.98■□□□□ 0.95
Scn1aA2APX8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn1aA2APX8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Scn1aA2APX8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Scn1aA2APX8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Scn1aA2APX8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn1aA2APX8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.97■□□□□ 0.95
Scn1aA2APX8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn1aA2APX8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Scn1aA2APX8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn1aA2APX8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn1aA2APX8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn1aA2APX8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn1aA2APX8 Gm43060-201ENSMUST00000200621 289 ntBASIC20.96■□□□□ 0.95
Scn1aA2APX8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn1aA2APX8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn1aA2APX8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn1aA2APX8 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.95■□□□□ 0.94
Scn1aA2APX8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Scn1aA2APX8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.95■□□□□ 0.94
Scn1aA2APX8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn1aA2APX8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn1aA2APX8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn1aA2APX8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Scn1aA2APX8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn1aA2APX8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn1aA2APX8 Gm10493-201ENSMUST00000097270 612 ntBASIC20.94■□□□□ 0.94
Scn1aA2APX8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn1aA2APX8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn1aA2APX8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn1aA2APX8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scn1aA2APX8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Scn1aA2APX8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Scn1aA2APX8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn1aA2APX8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn1aA2APX8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn1aA2APX8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.93■□□□□ 0.94
Scn1aA2APX8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn1aA2APX8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn1aA2APX8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn1aA2APX8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn1aA2APX8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn1aA2APX8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Scn1aA2APX8 Gm27801-201ENSMUST00000184174 223 ntBASIC20.91■□□□□ 0.94
Scn1aA2APX8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn1aA2APX8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn1aA2APX8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn1aA2APX8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn1aA2APX8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn1aA2APX8 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.9■□□□□ 0.94
Scn1aA2APX8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.9■□□□□ 0.94
Scn1aA2APX8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Scn1aA2APX8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn1aA2APX8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn1aA2APX8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Scn1aA2APX8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.89■□□□□ 0.93
Scn1aA2APX8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn1aA2APX8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn1aA2APX8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms