Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
Shroom2A2ALU4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Shroom2A2ALU4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Shroom2A2ALU4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Shroom2A2ALU4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC32.11■■■□□ 2.73
Shroom2A2ALU4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Shroom2A2ALU4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC32.1■■■□□ 2.73
Shroom2A2ALU4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Shroom2A2ALU4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC32.1■■■□□ 2.73
Shroom2A2ALU4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC32.1■■■□□ 2.73
Shroom2A2ALU4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC32.1■■■□□ 2.73
Shroom2A2ALU4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Shroom2A2ALU4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Shroom2A2ALU4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Shroom2A2ALU4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
Shroom2A2ALU4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC32.09■■■□□ 2.73
Shroom2A2ALU4 Gm44672-201ENSMUST00000206944 1098 ntBASIC32.09■■■□□ 2.73
Shroom2A2ALU4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC32.09■■■□□ 2.73
Shroom2A2ALU4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Shroom2A2ALU4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Shroom2A2ALU4 Gm21362-201ENSMUST00000194272 928 ntBASIC32.08■■■□□ 2.73
Shroom2A2ALU4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Shroom2A2ALU4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Shroom2A2ALU4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC32.08■■■□□ 2.73
Shroom2A2ALU4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
Shroom2A2ALU4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
Shroom2A2ALU4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Shroom2A2ALU4 Gm6420-201ENSMUST00000193885 723 ntBASIC32.07■■■□□ 2.72
Shroom2A2ALU4 Rab3c-203ENSMUST00000224180 967 ntBASIC32.07■■■□□ 2.72
Shroom2A2ALU4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Shroom2A2ALU4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC32.07■■■□□ 2.72
Shroom2A2ALU4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
Shroom2A2ALU4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Shroom2A2ALU4 Gm10231-201ENSMUST00000181584 441 ntBASIC32.06■■■□□ 2.72
Shroom2A2ALU4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Shroom2A2ALU4 Gm10175-202ENSMUST00000208752 441 ntBASIC32.06■■■□□ 2.72
Shroom2A2ALU4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Shroom2A2ALU4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Shroom2A2ALU4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Shroom2A2ALU4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
Shroom2A2ALU4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC32.05■■■□□ 2.72
Shroom2A2ALU4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Shroom2A2ALU4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Shroom2A2ALU4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Shroom2A2ALU4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Shroom2A2ALU4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Shroom2A2ALU4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Shroom2A2ALU4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Shroom2A2ALU4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC32.03■■■□□ 2.72
Shroom2A2ALU4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Shroom2A2ALU4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Shroom2A2ALU4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Shroom2A2ALU4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Shroom2A2ALU4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
Shroom2A2ALU4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
Shroom2A2ALU4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC32.01■■■□□ 2.71
Shroom2A2ALU4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Shroom2A2ALU4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC32.01■■■□□ 2.71
Shroom2A2ALU4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC32■■■□□ 2.71
Shroom2A2ALU4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC32■■■□□ 2.71
Shroom2A2ALU4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Shroom2A2ALU4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Shroom2A2ALU4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Shroom2A2ALU4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Shroom2A2ALU4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Shroom2A2ALU4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Shroom2A2ALU4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Shroom2A2ALU4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC31.98■■■□□ 2.71
Shroom2A2ALU4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
Shroom2A2ALU4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Shroom2A2ALU4 AC153881.2-201ENSMUST00000214877 204 ntBASIC31.98■■■□□ 2.71
Shroom2A2ALU4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Shroom2A2ALU4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Shroom2A2ALU4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Shroom2A2ALU4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Shroom2A2ALU4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC31.97■■■□□ 2.71
Shroom2A2ALU4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
Shroom2A2ALU4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
Shroom2A2ALU4 AC153881.1-201ENSMUST00000214448 284 ntBASIC31.97■■■□□ 2.71
Shroom2A2ALU4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Shroom2A2ALU4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Shroom2A2ALU4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC31.96■■■□□ 2.71
Shroom2A2ALU4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Shroom2A2ALU4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC31.96■■■□□ 2.71
Shroom2A2ALU4 AC154649.1-201ENSMUST00000227392 384 ntBASIC31.96■■■□□ 2.71
Shroom2A2ALU4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Shroom2A2ALU4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Shroom2A2ALU4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Shroom2A2ALU4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Shroom2A2ALU4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Shroom2A2ALU4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC31.95■■■□□ 2.7
Shroom2A2ALU4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.7
Shroom2A2ALU4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms