Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.26■□□□□ 0.51
Scn2aA0A0J9YTW6 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.26■□□□□ 0.51
Scn2aA0A0J9YTW6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scn2aA0A0J9YTW6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2aA0A0J9YTW6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Scn2aA0A0J9YTW6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2aA0A0J9YTW6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2aA0A0J9YTW6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2aA0A0J9YTW6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2aA0A0J9YTW6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.25■□□□□ 0.51
Scn2aA0A0J9YTW6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2aA0A0J9YTW6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2aA0A0J9YTW6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Gm8493-201ENSMUST00000196881 489 ntBASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2aA0A0J9YTW6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2aA0A0J9YTW6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Scn2aA0A0J9YTW6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn2aA0A0J9YTW6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Mir6236-201ENSMUST00000184437 123 ntBASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Smad6-203ENSMUST00000179458 273 ntBASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2aA0A0J9YTW6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn2aA0A0J9YTW6 Gm26833-201ENSMUST00000180899 440 ntBASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2aA0A0J9YTW6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms