Protein–RNA interactions for Protein: A0A0B4J1P3

Ighv9-1, Immunoglobulin heavy variable 9-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-1A0A0B4J1P3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv9-1A0A0B4J1P3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Gm10399-202ENSMUST00000202768 748 ntBASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv9-1A0A0B4J1P3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms