Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.75■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Gm10399-202ENSMUST00000202768 748 ntBASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.71■□□□□ 0.59
Sirpb1aA0A0A6YYP6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.69■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms