Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ighv1-42A0A0A6YY38 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-42A0A0A6YY38 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-42A0A0A6YY38 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-42A0A0A6YY38 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Ighv1-42A0A0A6YY38 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm27801-201ENSMUST00000184174 223 ntBASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.39■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-42A0A0A6YY38 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-42A0A0A6YY38 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 AV356131-201ENSMUST00000206201 750 ntBASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.36■□□□□ 0.53
Ighv1-42A0A0A6YY38 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.35■□□□□ 0.53
Ighv1-42A0A0A6YY38 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Gm9988-201ENSMUST00000069786 435 ntBASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-42A0A0A6YY38 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-42A0A0A6YY38 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ighv1-42A0A0A6YY38 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-42A0A0A6YY38 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-42A0A0A6YY38 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.33■□□□□ 0.52
Ighv1-42A0A0A6YY38 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Ighv1-42A0A0A6YY38 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-42A0A0A6YY38 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-42A0A0A6YY38 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ighv1-42A0A0A6YY38 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gm29257-201ENSMUST00000186115 639 ntBASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-42A0A0A6YY38 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms