Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28557A0A087WQQ0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28557A0A087WQQ0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28557A0A087WQQ0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28557A0A087WQQ0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Gm28557A0A087WQQ0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28557A0A087WQQ0 Gm10399-202ENSMUST00000202768 748 ntBASIC17.81■□□□□ 0.44
Gm28557A0A087WQQ0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28557A0A087WQQ0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28557A0A087WQQ0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28557A0A087WQQ0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28557A0A087WQQ0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28557A0A087WQQ0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Gm28557A0A087WQQ0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.77■□□□□ 0.43
Gm28557A0A087WQQ0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28557A0A087WQQ0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 Gm43566-201ENSMUST00000196851 808 ntBASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gm28557A0A087WQQ0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms