Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6n-7A0A075B6A6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6n-7A0A075B6A6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6n-7A0A075B6A6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6n-7A0A075B6A6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6n-7A0A075B6A6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-7A0A075B6A6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm27454-201ENSMUST00000185090 204 ntBASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-7A0A075B6A6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-7A0A075B6A6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-7A0A075B6A6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-7A0A075B6A6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Gm45417-201ENSMUST00000209533 758 ntBASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-7A0A075B6A6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-7A0A075B6A6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-7A0A075B6A6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav6n-7A0A075B6A6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-7A0A075B6A6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-7A0A075B6A6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6n-7A0A075B6A6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6n-7A0A075B6A6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6n-7A0A075B6A6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6n-7A0A075B6A6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Trav6n-7A0A075B6A6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms