Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Trav12d-3A0A075B6A4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Trav12d-3A0A075B6A4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav12d-3A0A075B6A4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12d-3A0A075B6A4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-3A0A075B6A4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-3A0A075B6A4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-3A0A075B6A4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-3A0A075B6A4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-3A0A075B6A4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-3A0A075B6A4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-3A0A075B6A4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms