Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm15031-201ENSMUST00000121341 210 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm24346-201ENSMUST00000158712 194 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm17221-201ENSMUST00000163909 481 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm17073-201ENSMUST00000168069 556 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Mir7035-201ENSMUST00000184713 82 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm20781-201ENSMUST00000193154 693 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm21736-201ENSMUST00000195399 693 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm34023-201ENSMUST00000195539 217 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm45258-201ENSMUST00000210042 853 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Gm3550W4VSN7 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 CT009718.3-201ENSMUST00000221116 367 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm18968-201ENSMUST00000221319 862 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm16380-201ENSMUST00000077997 478 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 AC165148.1-201ENSMUST00000224795 2372 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm44445-201ENSMUST00000204075 2683 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm7052-201ENSMUST00000167568 1512 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC8.8□□□□□ -1
Gm3550W4VSN7 AC125351.1-201ENSMUST00000221438 2223 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm5764-201ENSMUST00000118817 885 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC8.8□□□□□ -1
Gm3550W4VSN7 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm5801-201ENSMUST00000182247 780 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm17798-201ENSMUST00000182282 1035 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm37365-201ENSMUST00000193109 409 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm19918-201ENSMUST00000194858 400 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm44216-201ENSMUST00000203942 157 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC8.8□□□□□ -1
Gm3550W4VSN7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC8.8□□□□□ -1
Gm3550W4VSN7 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC8.8□□□□□ -1
Gm3550W4VSN7 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm3550W4VSN7 n-R5s185-201ENSMUST00000083953 119 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms