Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chmp2aQ9DB34 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm44510-201ENSMUST00000206288 4532 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm12453-201ENSMUST00000121981 331 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm8451-201ENSMUST00000170338 447 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm7539-201ENSMUST00000189789 630 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm37141-201ENSMUST00000191938 422 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm44304-201ENSMUST00000200509 145 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm45310-201ENSMUST00000210436 275 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm26782-203ENSMUST00000227103 751 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm5453-201ENSMUST00000080866 447 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chmp2aQ9DB34 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm13981-201ENSMUST00000122360 447 ntBASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm18801-201ENSMUST00000186616 536 ntBASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.85□□□□□ -0.67
Chmp2aQ9DB34 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms