Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm45610-201ENSMUST00000209227 784 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim13Q9CYB0 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm15285-201ENSMUST00000119271 473 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm6407-201ENSMUST00000176468 549 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm37986-201ENSMUST00000193285 383 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm42780-201ENSMUST00000197083 734 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm44420-201ENSMUST00000203669 490 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm44100-201ENSMUST00000204329 436 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm8162-201ENSMUST00000213951 665 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.64□□□□□ -0.87
Trim13Q9CYB0 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms