Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm30196-201ENSMUST00000208957 160 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm15283-202ENSMUST00000221427 818 ntTSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 AC149294.3-201ENSMUST00000226888 732 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Sell-202ENSMUST00000097491 1215 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Asgr1-203ENSMUST00000108585 1169 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Snhg17-208ENSMUST00000154242 346 ntTSL 3 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm5977-201ENSMUST00000174304 573 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Rcan2-203ENSMUST00000177857 984 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Rnase11-201ENSMUST00000076106 713 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm9430-201ENSMUST00000121232 1527 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm38379-201ENSMUST00000194351 1525 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm17815-201ENSMUST00000198305 895 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm39128-201ENSMUST00000208237 1094 ntTSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm18780-201ENSMUST00000209594 574 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm16252-202ENSMUST00000215604 1232 ntTSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 AC163038.4-201ENSMUST00000224942 474 ntBASIC9.56□□□□□ -0.88
Spg11Q3UHA3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 1700017D01Rik-201ENSMUST00000025635 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Lyrm7-205ENSMUST00000144164 1674 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Spg11Q3UHA3 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 n-R5s2-201ENSMUST00000101968 119 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 n-R5s194-201ENSMUST00000104719 119 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm8865-201ENSMUST00000125697 430 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm16199-201ENSMUST00000160032 288 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm3617-201ENSMUST00000173076 555 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 n-R5s112-201ENSMUST00000178208 119 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 n-R5s125-201ENSMUST00000179377 119 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 n-R5s120-201ENSMUST00000180000 119 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 AC152946.3-201ENSMUST00000219424 280 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 n-R5s33-201ENSMUST00000093713 119 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Fam187b-201ENSMUST00000058093 1485 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms