Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm13792-201ENSMUST00000121350 423 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC10.7□□□□□ -0.7
Ybx1P62960 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC10.7□□□□□ -0.7
Ybx1P62960 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Gm20474-201ENSMUST00000180089 596 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 Kif4-ps-202ENSMUST00000185083 652 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 Gm2474-201ENSMUST00000195162 559 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Gm40332-201ENSMUST00000199847 938 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.7□□□□□ -0.7
Ybx1P62960 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC10.7□□□□□ -0.7
Ybx1P62960 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Ybx1P62960 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Ybx1P62960 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Ybx1P62960 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Ybx1P62960 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ybx1P62960 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Ybx1P62960 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ybx1P62960 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ybx1P62960 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ybx1P62960 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
Ybx1P62960 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm24981-201ENSMUST00000104459 132 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm14571-201ENSMUST00000118292 570 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 Gm6500-201ENSMUST00000119412 451 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 Gm12420-201ENSMUST00000119869 1048 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm22388-201ENSMUST00000158194 248 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm2316-201ENSMUST00000190613 921 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC10.69□□□□□ -0.7
Ybx1P62960 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm3889-201ENSMUST00000212467 612 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 AC161877.1-201ENSMUST00000227736 699 ntBASIC10.69□□□□□ -0.7
Ybx1P62960 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.69□□□□□ -0.7
Ybx1P62960 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.69□□□□□ -0.7
Ybx1P62960 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.69□□□□□ -0.7
Ybx1P62960 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ybx1P62960 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ybx1P62960 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Gm5174-201ENSMUST00000171131 1423 ntBASIC10.68□□□□□ -0.7
Ybx1P62960 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.68□□□□□ -0.7
Ybx1P62960 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.68□□□□□ -0.7
Ybx1P62960 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ybx1P62960 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.68□□□□□ -0.7
Ybx1P62960 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ybx1P62960 Gm24161-201ENSMUST00000104592 130 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms