Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Lmo4P61969 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm24066-201ENSMUST00000104515 131 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm13700-201ENSMUST00000118624 1128 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Gm15285-201ENSMUST00000119271 473 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Gm14034-201ENSMUST00000120147 551 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm24352-201ENSMUST00000158966 125 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm21963-201ENSMUST00000179519 330 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm29808-201ENSMUST00000194419 468 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Gm43275-201ENSMUST00000202053 1020 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm7924-201ENSMUST00000203975 785 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Gm32111-201ENSMUST00000207689 846 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
Lmo4P61969 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC8.4□□□□□ -1.06
Lmo4P61969 Gm18646-201ENSMUST00000212240 1063 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.4□□□□□ -1.06
Lmo4P61969 Arhgef33-207ENSMUST00000224966 490 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 AC123533.3-201ENSMUST00000228056 454 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Lmo4P61969 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Lmo4P61969 n-R5s25-201ENSMUST00000082923 119 ntBASIC8.4□□□□□ -1.06
Lmo4P61969 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Lmo4P61969 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.07
Lmo4P61969 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Lmo4P61969 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.4□□□□□ -1.07
Lmo4P61969 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Lmo4P61969 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC8.4□□□□□ -1.07
Lmo4P61969 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC8.4□□□□□ -1.07
Lmo4P61969 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Lmo4P61969 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.4□□□□□ -1.07
Lmo4P61969 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Lmo4P61969 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Lmo4P61969 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC8.39□□□□□ -1.07
Lmo4P61969 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm11540-201ENSMUST00000117457 780 ntBASIC8.39□□□□□ -1.07
Lmo4P61969 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC8.39□□□□□ -1.07
Lmo4P61969 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.39□□□□□ -1.07
Lmo4P61969 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm26356-201ENSMUST00000158217 283 ntBASIC8.39□□□□□ -1.07
Lmo4P61969 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm23521-201ENSMUST00000177845 110 ntBASIC8.39□□□□□ -1.07
Lmo4P61969 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm7583-201ENSMUST00000182941 1005 ntBASIC8.39□□□□□ -1.07
Lmo4P61969 Gm30652-201ENSMUST00000199103 430 ntBASIC8.39□□□□□ -1.07
Lmo4P61969 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC8.39□□□□□ -1.07
Lmo4P61969 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC8.39□□□□□ -1.07
Lmo4P61969 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Lmo4P61969 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
Lmo4P61969 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Lmo4P61969 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms