Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Gm15132-201ENSMUST00000118581 652 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Gm17107-201ENSMUST00000170983 553 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Gm26532-201ENSMUST00000180630 690 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Gm6216-201ENSMUST00000182390 687 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Ddx6P54823 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Ddx6P54823 Gm19121-201ENSMUST00000215720 1022 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Ddx6P54823 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Gm26205-201ENSMUST00000082907 134 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.61□□□□□ -0.71
Ddx6P54823 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ddx6P54823 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.61□□□□□ -0.71
Ddx6P54823 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.61□□□□□ -0.71
Ddx6P54823 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ddx6P54823 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Ddx6P54823 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Ddx6P54823 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm12733-201ENSMUST00000119871 767 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm14370-201ENSMUST00000122460 868 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm15273-201ENSMUST00000142302 868 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm7023-201ENSMUST00000147295 868 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm14357-201ENSMUST00000178352 868 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm14361-201ENSMUST00000178547 868 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm14348-201ENSMUST00000179183 868 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm17797-201ENSMUST00000182175 997 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm6773-201ENSMUST00000182377 878 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm6967-201ENSMUST00000182599 1007 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm17944-201ENSMUST00000186351 643 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm21631-201ENSMUST00000195041 754 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.6□□□□□ -0.71
Ddx6P54823 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm18119-201ENSMUST00000219972 616 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC10.6□□□□□ -0.71
Ddx6P54823 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 AC161877.1-201ENSMUST00000227736 699 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Gm9790-201ENSMUST00000054148 288 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ddx6P54823 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.6□□□□□ -0.71
Ddx6P54823 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Ddx6P54823 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ddx6P54823 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ddx6P54823 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ddx6P54823 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ddx6P54823 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ddx6P54823 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ddx6P54823 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ddx6P54823 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ddx6P54823 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ddx6P54823 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms