Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClgnP52194 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC10.68□□□□□ -0.7
ClgnP52194 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ClgnP52194 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
ClgnP52194 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
ClgnP52194 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Gm14165-201ENSMUST00000121456 952 ntBASIC10.67□□□□□ -0.7
ClgnP52194 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.67□□□□□ -0.7
ClgnP52194 Gm23153-201ENSMUST00000175323 313 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Gm3786-201ENSMUST00000202659 378 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 Gm9139-201ENSMUST00000218817 700 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Gm5805-201ENSMUST00000072779 456 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClgnP52194 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC10.67□□□□□ -0.7
ClgnP52194 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ClgnP52194 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Gm7719-201ENSMUST00000182374 975 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.66□□□□□ -0.7
ClgnP52194 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Gm8625-201ENSMUST00000194185 1077 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Gm45310-201ENSMUST00000210436 275 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Gm29787-201ENSMUST00000222129 849 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Capsl-202ENSMUST00000226688 739 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.66□□□□□ -0.7
ClgnP52194 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
ClgnP52194 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ClgnP52194 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Gm44062-201ENSMUST00000203312 4857 ntBASIC10.66□□□□□ -0.7
ClgnP52194 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClgnP52194 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms