Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm26368-201ENSMUST00000157826 118 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm6606-201ENSMUST00000193613 947 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm43506-201ENSMUST00000200675 753 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 CT025645.2-201ENSMUST00000223278 3827 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm14005-208ENSMUST00000223654 681 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm6478-201ENSMUST00000099450 742 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Gm9220-201ENSMUST00000190721 2544 ntBASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Smc1aQ9CU62 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smc1aQ9CU62 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Snord17-201ENSMUST00000104526 238 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm16459-201ENSMUST00000121443 686 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm25569-201ENSMUST00000157175 131 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC11.7□□□□□ -0.54
Smc1aQ9CU62 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smc1aQ9CU62 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 120 ms