Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm6960-201ENSMUST00000051629 639 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Ttc16-205ENSMUST00000161089 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm21276-201ENSMUST00000179666 2626 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccdc28bQ8CEG5 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccdc28bQ8CEG5 Armcx5-201ENSMUST00000096321 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccdc28bQ8CEG5 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccdc28bQ8CEG5 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccdc28bQ8CEG5 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccdc28bQ8CEG5 Gm45205-201ENSMUST00000205745 3330 ntBASIC10.27□□□□□ -0.76
Ccdc28bQ8CEG5 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Zfp469-202ENSMUST00000187142 3082 ntBASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Rsrc1-201ENSMUST00000046542 3062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Gm28775-201ENSMUST00000186918 2167 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Mir877-201ENSMUST00000104738 85 ntBASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Gm11949-201ENSMUST00000117640 372 ntBASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Gm43163-201ENSMUST00000196571 442 ntBASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Gm10263-201ENSMUST00000085163 300 ntBASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Tcp10b-201ENSMUST00000086787 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccdc28bQ8CEG5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Zbtb8os-204ENSMUST00000141235 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Klf17-201ENSMUST00000062747 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm10629-201ENSMUST00000137706 2014 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Trpv2-202ENSMUST00000102643 2650 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 AC154171.3-201ENSMUST00000224519 2505 ntBASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm14942-201ENSMUST00000119642 336 ntBASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm13019-201ENSMUST00000120000 276 ntBASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm4726-201ENSMUST00000135604 736 ntBASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm6425-201ENSMUST00000136332 790 ntBASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm6019-201ENSMUST00000148369 736 ntBASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm37350-201ENSMUST00000192782 313 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccdc28bQ8CEG5 Gm44304-201ENSMUST00000200509 145 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms