Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gm19173-201ENSMUST00000204494 1523 ntBASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Spg11Q3UHA3 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Spg11Q3UHA3 Gm12220-201ENSMUST00000118476 172 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm13655-201ENSMUST00000119695 745 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm22198-201ENSMUST00000122659 307 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm16304-201ENSMUST00000129972 775 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm8982-201ENSMUST00000184198 1295 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm18894-201ENSMUST00000198794 694 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm42538-202ENSMUST00000199431 358 ntTSL 3 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm2253-201ENSMUST00000211775 414 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Fanci-202ENSMUST00000118959 1301 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm5054-201ENSMUST00000119351 453 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm15798-201ENSMUST00000120082 408 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm12696-201ENSMUST00000122361 905 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm17169-201ENSMUST00000171382 351 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Pou1f1-203ENSMUST00000176038 1174 ntTSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm18513-201ENSMUST00000177313 560 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm38320-201ENSMUST00000192767 1281 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm8992-201ENSMUST00000204463 502 ntBASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Tmem14a-201ENSMUST00000027064 1261 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Ang2-201ENSMUST00000051274 438 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Spg11Q3UHA3 Gm8644-201ENSMUST00000118619 596 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm12250-201ENSMUST00000119467 1274 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm6341-201ENSMUST00000119683 411 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Aamdc-214ENSMUST00000178078 723 ntTSL 2 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm6967-201ENSMUST00000182599 1007 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm44778-201ENSMUST00000206447 668 ntTSL 3 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 AC125019.1-201ENSMUST00000224809 908 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Defa32-201ENSMUST00000084041 425 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Defa20-201ENSMUST00000084042 425 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gskip-201ENSMUST00000051934 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Ces5a-201ENSMUST00000077816 1728 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm17026-201ENSMUST00000166674 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Gm17124-201ENSMUST00000168320 1379 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Spg11Q3UHA3 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms