Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm7344-201ENSMUST00000212122 1222 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.02□□□□□ -0.64
Trim43aQ3TL54 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim43aQ3TL54 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trim43aQ3TL54 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim43aQ3TL54 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim43aQ3TL54 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gm11801-201ENSMUST00000117807 746 ntBASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gm11980-201ENSMUST00000121445 986 ntBASIC11.02□□□□□ -0.65
Trim43aQ3TL54 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gm30671-201ENSMUST00000214898 318 ntBASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Gm7589-201ENSMUST00000085631 534 ntBASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trim43aQ3TL54 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm12899-201ENSMUST00000120565 551 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm5298-201ENSMUST00000201122 892 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm45594-201ENSMUST00000211717 241 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim43aQ3TL54 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms