Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm9540-201ENSMUST00000188230 478 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.35□□□□□ -0.91
Lsm3P62311 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
Lsm3P62311 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Gm2517-201ENSMUST00000215651 348 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lsm3P62311 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Lsm3P62311 AC123731.1-201ENSMUST00000227417 1403 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Cflar-201ENSMUST00000069333 3163 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Clstn3-201ENSMUST00000008297 4014 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Zfp39-201ENSMUST00000102703 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Gm37484-201ENSMUST00000195378 2523 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Plekhs1-202ENSMUST00000178590 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Plekhs1-201ENSMUST00000039666 2378 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Gm15666-202ENSMUST00000219490 2796 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Ablim1-206ENSMUST00000111528 2481 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Btnl6-201ENSMUST00000075483 1620 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Stx16-202ENSMUST00000087908 3865 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Wdr27-201ENSMUST00000170386 2574 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Prpf31-201ENSMUST00000008517 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Fgd3-202ENSMUST00000110086 2628 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Gm12389-201ENSMUST00000117696 418 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Gm13665-201ENSMUST00000120830 528 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm27516-201ENSMUST00000184237 98 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Gm5266-201ENSMUST00000187302 1162 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm7003-201ENSMUST00000195089 312 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm13097-201ENSMUST00000210722 397 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 AC157650.1-201ENSMUST00000224582 610 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Slc1a1-201ENSMUST00000025875 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm7399-201ENSMUST00000032395 858 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Slc5a4a-201ENSMUST00000020450 2055 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Lsm3P62311 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Smoc1-203ENSMUST00000129362 3385 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 C86187-202ENSMUST00000209497 2415 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Lpl-201ENSMUST00000015712 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Gm44815-201ENSMUST00000206812 1633 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm3P62311 4930556L07Rik-201ENSMUST00000134422 1490 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm3P62311 AC154575.1-201ENSMUST00000227166 1474 ntBASIC9.34□□□□□ -0.91
Lsm3P62311 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lsm3P62311 AC117245.3-201ENSMUST00000217495 2176 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Ccdc86-201ENSMUST00000025639 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms