Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm13281-201ENSMUST00000120871 567 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Gm13505-201ENSMUST00000121666 817 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC10.63□□□□□ -0.71
Ddx6P54823 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
Ddx6P54823 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Mir7088-201ENSMUST00000184227 86 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Gm2316-201ENSMUST00000190613 921 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm37921-201ENSMUST00000194333 695 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm45481-201ENSMUST00000209717 877 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm18749-201ENSMUST00000222410 692 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Arhgef33-207ENSMUST00000224966 490 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Ddx6P54823 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Vgll3-202ENSMUST00000227997 1383 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Ddx6P54823 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ddx6P54823 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ddx6P54823 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.62□□□□□ -0.71
Ddx6P54823 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.62□□□□□ -0.71
Ddx6P54823 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.62□□□□□ -0.71
Ddx6P54823 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.62□□□□□ -0.71
Ddx6P54823 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.62□□□□□ -0.71
Ddx6P54823 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm20474-201ENSMUST00000180089 596 ntBASIC10.62□□□□□ -0.71
Ddx6P54823 Gm43866-201ENSMUST00000203894 839 ntBASIC10.62□□□□□ -0.71
Ddx6P54823 Gm44236-201ENSMUST00000204492 513 ntBASIC10.62□□□□□ -0.71
Ddx6P54823 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Ddx6P54823 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ddx6P54823 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Ddx6P54823 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ddx6P54823 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.61□□□□□ -0.71
Ddx6P54823 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.61□□□□□ -0.71
Ddx6P54823 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ddx6P54823 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Ddx6P54823 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ddx6P54823 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ddx6P54823 Mir744-201ENSMUST00000103261 100 ntBASIC10.61□□□□□ -0.71
Ddx6P54823 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms