Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm25953-201ENSMUST00000175338 83 ntBASIC8.43□□□□□ -1.06
P04940 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC8.43□□□□□ -1.06
P04940 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC8.43□□□□□ -1.06
P04940 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC8.43□□□□□ -1.06
P04940 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC8.43□□□□□ -1.06
P04940 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC8.43□□□□□ -1.06
P04940 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC8.43□□□□□ -1.06
P04940 AC134860.5-201ENSMUST00000225071 1249 ntBASIC8.43□□□□□ -1.06
P04940 Gm43305-202ENSMUST00000225083 705 ntBASIC8.43□□□□□ -1.06
P04940 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
P04940 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
P04940 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
P04940 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 AC129336.1-201ENSMUST00000220224 2277 ntBASIC8.43□□□□□ -1.06
P04940 Gm12912-201ENSMUST00000121596 1381 ntBASIC8.43□□□□□ -1.06
P04940 Gm44826-201ENSMUST00000207648 2332 ntBASIC8.43□□□□□ -1.06
P04940 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
P04940 CT868720.1-201ENSMUST00000223069 2544 ntBASIC8.43□□□□□ -1.06
P04940 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Gm31763-202ENSMUST00000218205 1724 ntBASIC8.43□□□□□ -1.06
P04940 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
P04940 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
P04940 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC8.43□□□□□ -1.06
P04940 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
P04940 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC8.42□□□□□ -1.06
P04940 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 AC117245.3-201ENSMUST00000217495 2176 ntBASIC8.42□□□□□ -1.06
P04940 Gm43817-201ENSMUST00000196459 2262 ntBASIC8.42□□□□□ -1.06
P04940 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
P04940 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
P04940 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC8.42□□□□□ -1.06
P04940 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC8.42□□□□□ -1.06
P04940 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC8.42□□□□□ -1.06
P04940 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC8.42□□□□□ -1.06
P04940 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC8.42□□□□□ -1.06
P04940 Gm22146-201ENSMUST00000157397 288 ntBASIC8.42□□□□□ -1.06
P04940 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
P04940 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC8.42□□□□□ -1.06
P04940 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC8.42□□□□□ -1.06
P04940 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Gm6773-201ENSMUST00000182377 878 ntBASIC8.42□□□□□ -1.06
P04940 Gm7516-201ENSMUST00000186198 706 ntBASIC8.42□□□□□ -1.06
P04940 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC8.42□□□□□ -1.06
P04940 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC8.42□□□□□ -1.06
P04940 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC8.42□□□□□ -1.06
P04940 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
P04940 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Gm15784-201ENSMUST00000120260 1462 ntBASIC8.42□□□□□ -1.06
P04940 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
P04940 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC8.42□□□□□ -1.06
P04940 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04940 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
P04940 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
P04940 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
P04940 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
P04940 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
P04940 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms