Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC8.85□□□□□ -0.99
Gm3550W4VSN7 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Gm3550W4VSN7 Gm6170-201ENSMUST00000187672 1388 ntBASIC8.85□□□□□ -0.99
Gm3550W4VSN7 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm42449-201ENSMUST00000200349 2258 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 AC156802.2-203ENSMUST00000226032 1906 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm22442-201ENSMUST00000157256 144 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm8918-201ENSMUST00000190587 1087 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm44056-201ENSMUST00000204623 1427 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 AC158392.3-201ENSMUST00000224271 1284 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 AC129308.3-201ENSMUST00000225652 524 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Mir194-2-201ENSMUST00000083648 86 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm21115-201ENSMUST00000187565 2578 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC8.84□□□□□ -0.99
Gm3550W4VSN7 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC8.84□□□□□ -0.99
Gm3550W4VSN7 Gm5697-201ENSMUST00000122295 2482 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm6158-201ENSMUST00000109467 904 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm11824-201ENSMUST00000120191 846 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Gm3550W4VSN7 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm26119-201ENSMUST00000175601 104 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Mir6998-201ENSMUST00000183343 64 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm27953-201ENSMUST00000185171 143 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm44304-201ENSMUST00000200509 145 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm43811-201ENSMUST00000202862 695 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm44551-201ENSMUST00000208804 171 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm18556-201ENSMUST00000219748 1031 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms