Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm25569-201ENSMUST00000157175 131 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm26208-201ENSMUST00000158677 124 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm17214-201ENSMUST00000164501 541 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm37390-201ENSMUST00000192452 872 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm6794-201ENSMUST00000203829 457 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm31941-201ENSMUST00000209689 350 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp2aQ9DB34 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm5526-201ENSMUST00000153604 423 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm20414-201ENSMUST00000172918 646 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm26943-201ENSMUST00000182295 957 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Mir6387-201ENSMUST00000184042 108 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Atf7-201ENSMUST00000096143 390 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp2aQ9DB34 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms