Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smarcd2Q99JR8 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm13215-201ENSMUST00000117559 472 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm13002-201ENSMUST00000119286 682 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm12011-201ENSMUST00000119734 618 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm11824-201ENSMUST00000120191 846 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm26021-201ENSMUST00000158664 131 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm16574-201ENSMUST00000159301 745 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm6967-201ENSMUST00000182599 1007 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm5291-201ENSMUST00000201965 899 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm18646-201ENSMUST00000212240 1063 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm38309-201ENSMUST00000192063 1518 ntBASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smarcd2Q99JR8 Gm7701-201ENSMUST00000163185 1479 ntBASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm38227-201ENSMUST00000193036 1602 ntBASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm11427-201ENSMUST00000117952 1696 ntBASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm9864-201ENSMUST00000090043 1656 ntBASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.55□□□□□ -0.72
Smarcd2Q99JR8 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms